5JBJ · B / C

rna_03875__5JBJ_1_B-C

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_03875__5JBJ_1_B-C
RNA-Solo ID: rna_03875
Split identity: rna_03875
Source structure: 5JBJ_1_X-Y
Length: 24 nt
Canonical chains: B, C
Partition: train

MD-derived metadata

1.58 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 13.13 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GGUAGCGCUACCGGUAGCGCUACC

Canonical chain	PDB chain	label_asym_id	auth_asym_id
B	B	B	X
C	C	C	Y

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

022f5102ba2e92cbeef064ae131795215e305dc28e72161a01dcae5cd09ff604

rna.gro · SHA-256

e67bce5325e848085bdc550de68160b29aa047a87dd4de3a20926571f21d68da

rna.pdb · SHA-256

c1dc1f5c41a1774656a51b2561f5e7d49fa51217f3cee5dec29c1b4655d47871