6MDZ · C / E

rna_03888__6MDZ_1_C-E

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_03888__6MDZ_1_C-E
RNA-Solo ID: rna_03888
Split identity: rna_03888
Source structure: 6MDZ_1_E-C
Length: 43 nt
Canonical chains: C, E
Partition: train

MD-derived metadata

4.45 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 18.84 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

UGGAGUGUGACAAUGGUGUUAAACACCAUUUCCACACUCCAAA

Canonical chain	PDB chain	label_asym_id	auth_asym_id
C	C	C	C
E	E	E	E

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

892a485d1740aa794ac81af13f50d653d65282828fca12a96bb2646d40348938

rna.gro · SHA-256

c9a7ecdd9c83d21c46fcdfed92a7932ff909e40433473f19da362808b1665bf9

rna.pdb · SHA-256

d2549c52fb8d1e235002f4383138cdb35dfe8aa89ae50f72e1f25494e7b7bad2