6SZU · D / E

rna_03939__6SZU_1_D-E

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_03939__6SZU_1_D-E
RNA-Solo ID: rna_03939
Split identity: rna_03939
Source structure: 6SZU_1_V-M
Length: 54 nt
Canonical chains: D, E
Partition: test_flex

MD-derived metadata

16.93 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 28.06 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

AGUAGUAACAAGAGCAAUGUGUCCGUCUCGCCUCUGCUUCUGCUGACGGACACA

Canonical chain	PDB chain	label_asym_id	auth_asym_id
D	D	D	V
E	E	E	M

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

92b0a81629432d9fd56f057c2eaff6eb0e08dadd84ad61a2927916792f1ec975

rna.gro · SHA-256

8b09faf559b346a7d46e0ce76cbdd178232a19416b2d50848fb97579939ae0d3

rna.pdb · SHA-256

4f7e81d8ba6ea0d4704adaac5aacfbbf6c3894fa02cf5e11788be76230123668