7ECP · A / B / C / D

rna_04002__7ECP_1_A-B-C-D

Coming soon
Source PDB ↗

Sample identity

Trajectory ID
rna_04002__7ECP_1_A-B-C-D
RNA-Solo ID
rna_04002
Split identity
rna_04002
Source structure
7ECP_1_A-B
Length
48 nt
Canonical chains
A, B, C, D
Partition
val

MD-derived metadata

3.83 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration
19.43 Å · heavy atoms
Frames
1,001 · 0–100 ns
Coordinate status
pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GGGCCCGGUCCCGGGCCCGGUCCCGGGCCCGGUCCCGGGCCCGGUCCC
Canonical chainPDB chainlabel_asym_idauth_asym_id
AAAA
BBBB
CCCC
DDDD

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

FileContentsAvailability
rna.xtcRNA-only coordinates · 1,001 framesComing soon
rna.groMatching initial coordinates / topologyComing soon
rna.pdbMatching initial structure with PDB chain mappingComing soon
rna.xtc · SHA-256

c70ef767e4837266a7b3d9a0cb685c5b3d1855201ac050339466419d36888ac5

rna.gro · SHA-256

b1d739fe989bb4dc2b2125daa5ab50f00f2fb8578c62869c85062c82095d5fd9

rna.pdb · SHA-256

1a4140310fb0593b74c7d51145ee1c337e5c475d8cd5a341d91f0c66392fda3f