2PXV · A

rna_04004__2PXV_1_A

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_04004__2PXV_1_A
RNA-Solo ID: rna_04004
Split identity: rna_04004
Source structure: 2PXV_1_B
Length: 49 nt
Canonical chains: A
Partition: train

MD-derived metadata

3.92 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 21.51 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GGUGGUGUUUACCAGGUCAGGUCCGAAAGGAAGCAGCCAAGGCACUGCC

Canonical chain	PDB chain	label_asym_id	auth_asym_id
A	A	A	B

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

40d30b71bfd9ebc32385966811fe0bd9bd0d59aaa5e87d5632e6ff343ab22146

rna.gro · SHA-256

28dc8675d7cb1fa3c207d8d996038e5351a12568a3934770e2a70dce4fc2398d

rna.pdb · SHA-256

5d19335c9f2e1e1b8ffc33ab598975971cfb3533134f2c07e609865dbb8a6fa2