1DFU · A / B

rna_04025__1DFU_1_A-B

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_04025__1DFU_1_A-B
RNA-Solo ID: rna_04025
Split identity: rna_04025
Source structure: 1DFU_1_M-N
Length: 38 nt
Canonical chains: A, B
Partition: train

MD-derived metadata

3.21 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 18.64 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

CCCAUGCGAGAGUAGGGACUGCCGAUGGUAGUGUGGGG

Canonical chain	PDB chain	label_asym_id	auth_asym_id
A	A	A	M
B	B	B	N

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

046ad560e9a74e774bf8d1395f97f27ff96edb97ee98da2020b5edc54f6c812c

rna.gro · SHA-256

4b67bc02682d910f88a6f3d340c569c530f3c54b8842e5ec12fa0b4e07c81e6d

rna.pdb · SHA-256

cf0b60764214c12704c1c7bd4387044f94ed81fef838165f83fe198d1a4aa978