4PWD · F

rna_04066__4PWD_1_F

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_04066__4PWD_1_F
RNA-Solo ID: rna_04066
Split identity: rna_04066
Source structure: 4PWD_1_E
Length: 20 nt
Canonical chains: F
Partition: val

MD-derived metadata

8.60 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 19.06 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

CGGCGCCCGAAACAGGGACU

Canonical chain	PDB chain	label_asym_id	auth_asym_id
F	F	F	E

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

bda227e9cdd67451da7bdadf746f4188c9ab7fcb905bb2fffd2f42053c0d9cde

rna.gro · SHA-256

207efb2e6ad36449498eecda70a083f18834b363fcac6989a336e84caebaaae1

rna.pdb · SHA-256

9563d6b9f35a3e3039d349eb3ef8e4f98299c2bef47b68d2cfc233942d8e5a62