8AF0 · A / B

rna_04080__8AF0_1_A-B

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_04080__8AF0_1_A-B
RNA-Solo ID: rna_04080
Split identity: rna_04080
Source structure: 8AF0_1_C-D
Length: 38 nt
Canonical chains: A, B
Partition: train

MD-derived metadata

2.81 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 17.01 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GCCCGCCUGUCACGCGGGCGCCCGCCUGUCACGCGGGC

Canonical chain	PDB chain	label_asym_id	auth_asym_id
A	A	A	C
B	B	B	D

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

a25e8dac2a1caab2f0c58df119205983da5a62bc10630d02b3713bd0ee361616

rna.gro · SHA-256

6722b0c6dcf4dcae5e2067b169947e344ce1051d376ecbd28bfa8910f9aee1ea

rna.pdb · SHA-256

2ba4935d2b5017927f109c7869a2c08fa2dd1b01b97fbb57351c0905f47bd72f