5XON · M

rna_04087__5XON_1_M

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_04087__5XON_1_M
RNA-Solo ID: rna_04087
Split identity: rna_04087
Source structure: 5XON_1_P
Length: 16 nt
Canonical chains: M
Partition: train

MD-derived metadata

9.21 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 14.77 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

UCUUUUAUCGAGAGGU

Canonical chain	PDB chain	label_asym_id	auth_asym_id
M	M	M	P

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

b7a319d2d5038b686ad49bc6dd582eb24469f60e80cf4f513e88c62951c9b941

rna.gro · SHA-256

1170cbcdc9d6474c0b62eb52ce166af43db04bbad7c54984ca3d2c32cf296310

rna.pdb · SHA-256

b06c30d2deb4fcf1341f0ddcdff04a28ff8ffaad50ece6cfcfef0daa68e13682