6SIC · GA

rna_04135_V__6SIC_1_GA

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_04135_V__6SIC_1_GA
RNA-Solo ID: rna_04135_V
Split identity: rna_04135_V
Source structure: 6SIC_1_V
Length: 48 nt
Canonical chains: GA
Partition: train

MD-derived metadata

20.72 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 40.31 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

AUUGAAAGUUCAAAGCUUAGAUACCCUGGAGGGAAACCAGACUUAACA

Canonical chain	PDB chain	label_asym_id	auth_asym_id
GA	A	GA	V

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: geometry:rmsd_high

Inherited warnings: geometry:rmsd_high

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

b7ad8580bfc17a8defa12b783f6f8351e11749e5594333eddec80e451095b0ad

rna.gro · SHA-256

56f8cc11bb221ad0941e0b96fe37744dc1cb9ee7f162604b53e1a8c01be25d44

rna.pdb · SHA-256

a55229152260b16dc68ebb8eb4de3e8edc0fa473b80c990cfa294eab4e23ed03